STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83640.1Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165. (499 aa)    
Predicted Functional Partners:
AEF84400.1
Putative histidine kinase internal region; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF06580.
 
  
 0.952
AEF85784.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.932
AEF86717.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
  
0.927
AEF86381.1
D-xylose-binding protein.
 
     0.921
AEF86803.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
 0.858
AEF86080.1
Chemotaxis protein CheA; Identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; match to protein family HMM PF07194.
 
 
 0.782
AEF85733.1
ABC transporter.
 
     0.774
AEF85392.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF84382.1
Putative response regulator; Identified by match to protein family HMM PF00072.
 
   
 0.745
AEF84769.1
Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.651
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.