STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85215.1Tpl protein; Identified by match to protein family HMM PF04468. (314 aa)    
Predicted Functional Partners:
AEF85351.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03885.
  
  
 0.767
rny
Conserved hypothetical protein; Endoribonuclease that initiates mRNA decay.
 
  
 0.760
AEF83636.1
Flagellar filament 34.5 kDa core protein (Class B); Component of the core of the flagella. Belongs to the bacterial flagellin family.
    
   0.739
flgD
Flagellar hook capping protein; Identified by match to protein family HMM PF03963.
    
   0.739
cheR
CheR methyltransferase, SAM-binding domain protein; Identified by match to protein family HMM PF01739; match to protein family HMM PF03705.
    
   0.739
AEF85642.1
Putative flagellar protein.
    
   0.739
AEF85105.1
Flagellar hook-basal body complex protein FliE.
   
   0.721
AEF86431.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04519.
     
 0.704
AEF86873.1
M23/M37 peptidase domain protein; Identified by match to protein family HMM PF01551.
       0.611
AEF84205.1
Dihydroorotate dehydrogenase, electron transfer subunit; Identified by match to protein family HMM PF00175.
 
    0.542
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.