Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84365.1 | AEF84731.1 | TREPR_3036 | TREPR_3035 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.894 |
| AEF84365.1 | AEF85838.1 | TREPR_3036 | TREPR_3034 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein. | 0.475 |
| AEF84365.1 | AEF86437.1 | TREPR_3036 | TREPR_3038 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | 0.695 |
| AEF84365.1 | AEF86866.1 | TREPR_3036 | TREPR_3037 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Fe3+ ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.987 |
| AEF84731.1 | AEF84365.1 | TREPR_3035 | TREPR_3036 | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.894 |
| AEF84731.1 | AEF85838.1 | TREPR_3035 | TREPR_3034 | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Conserved hypothetical protein. | 0.527 |
| AEF84731.1 | AEF86437.1 | TREPR_3035 | TREPR_3038 | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | 0.621 |
| AEF84731.1 | AEF86866.1 | TREPR_3035 | TREPR_3037 | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Fe3+ ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.947 |
| AEF85838.1 | AEF84365.1 | TREPR_3034 | TREPR_3036 | Conserved hypothetical protein. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.475 |
| AEF85838.1 | AEF84731.1 | TREPR_3034 | TREPR_3035 | Conserved hypothetical protein. | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.527 |
| AEF85838.1 | AEF86185.1 | TREPR_3034 | TREPR_3033 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.566 |
| AEF85838.1 | AEF86437.1 | TREPR_3034 | TREPR_3038 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | 0.433 |
| AEF85838.1 | AEF86866.1 | TREPR_3034 | TREPR_3037 | Conserved hypothetical protein. | Fe3+ ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.441 |
| AEF86185.1 | AEF85838.1 | TREPR_3033 | TREPR_3034 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein. | 0.566 |
| AEF86437.1 | AEF84365.1 | TREPR_3038 | TREPR_3036 | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.695 |
| AEF86437.1 | AEF84731.1 | TREPR_3038 | TREPR_3035 | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.621 |
| AEF86437.1 | AEF85838.1 | TREPR_3038 | TREPR_3034 | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | Conserved hypothetical protein. | 0.433 |
| AEF86437.1 | AEF86866.1 | TREPR_3038 | TREPR_3037 | Conserved hypothetical protein; Identified by match to protein family HMM PF04794. | Fe3+ ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.757 |
| AEF86866.1 | AEF84365.1 | TREPR_3037 | TREPR_3036 | Fe3+ ABC transporter permease; Identified by match to protein family HMM PF00528. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.987 |
| AEF86866.1 | AEF84731.1 | TREPR_3037 | TREPR_3035 | Fe3+ ABC transporter permease; Identified by match to protein family HMM PF00528. | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.947 |
page 1 of 2