Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEF86181.1Putative lipoprotein; Identified by match to protein family HMM PF01547. (423 aa)    
Predicted Functional Partners:
AEF85667.1
Multiple sugar-binding transport ATP-binding protein MsmK; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.619
AEF86919.1
Hypothetical protein; Identified by glimmer; putative.
       0.568
AEF85535.1
Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.559
AEF84772.1
Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.559
AEF84978.1
ABC-type sugar transport system, permease component; Identified by match to protein family HMM PF00528.
  
   0.482
AEF86363.1
Sugar ABC transporter permease; Identified by match to protein family HMM PF00528.
  
   0.482
AEF85630.1
Sugar ABC transporter permease; Identified by match to protein family HMM PF00528.
  
   0.482
AEF85976.1
Sugar ABC transporter permease; Identified by match to protein family HMM PF00528.
  
   0.482
AEF86696.1
Sugar ABC transporter permease; Identified by match to protein family HMM PF00528.
  
   0.482
AEF84178.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
   0.482
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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