STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84256.1Purine-cytosine permease-like protein; Identified by match to protein family HMM PF02133. (392 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.756
AEF83863.1
Aspartate carbamoyltransferase, regulatory subunit; Identified by match to protein family HMM PF01948.
   
  
 0.752
carB
Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02222; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369.
   
    0.671
AEF85061.1
Hypothetical protein; Identified by glimmer; putative.
       0.628
AEF85591.1
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase); Identified by match to protein family HMM PF01979.
  
  
 0.554
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.518
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
      
 0.491
AEF86575.1
Putative uracil phosphoribosyltransferase (umppyrophosphorylase) (uprtase).
   
  
 0.485
yedF
Selenium metabolism protein YedF; Identified by match to protein family HMM PF01206; match to protein family HMM TIGR03527; Belongs to the sulfur carrier protein TusA family.
 
     0.484
AEF86068.1
Identified by match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM TIGR01977.
 
     0.469
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.