STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86517.1(R)-2-hydroxyglutaryl-CoA dehydratase activator; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. (265 aa)    
Predicted Functional Partners:
AEF85261.1
2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.
 
 0.989
AEF84247.1
L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005.
       0.697
yedF
Selenium metabolism protein YedF; Identified by match to protein family HMM PF01206; match to protein family HMM TIGR03527; Belongs to the sulfur carrier protein TusA family.
 
     0.531
AEF87038.1
Probable amino-acid ABC transporter,substrate-binding protein; Identified by match to protein family HMM PF00497.
       0.507
selB
Selenocysteine-specific translation elongation factor; Identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.
 
     0.459
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
     0.440
AEF84709.1
Activator of 2-hydroxyglutaryl-CoA dehydratase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
 
   
0.429
AEF86263.1
CoA enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
 
   
0.423
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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