STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84426.1Conserved hypothetical protein; Identified by match to protein family HMM PF08719; match to protein family HMM TIGR02464. (202 aa)    
Predicted Functional Partners:
AEF86729.1
ATPase, AAA family; Identified by match to protein family HMM PF00004.
 
 
 
 0.818
AEF84252.1
ATPase, AAA family; Identified by match to protein family HMM PF00004.
 
 
 
 0.809
AEF86015.1
Conserved hypothetical protein.
       0.773
AEF86163.1
Appr-1-p processing domain protein; Identified by match to protein family HMM PF01661.
 
     0.757
AEF85322.1
NB-ARC domain protein; Identified by match to protein family HMM PF00400; match to protein family HMM PF00656.
 
 
 
 0.654
AEF85969.1
Putative RNA ligase; Identified by match to protein family HMM PF09513.
  
     0.636
AEF84514.1
Peptidase, S24 family; Identified by match to protein family HMM PF00717.
       0.488
AEF86086.1
Conserved hypothetical protein.
       0.483
AEF85694.1
Glycosyltransferase family 1, candidate beta-glycosyltransferase; Identified by match to protein family HMM PF03033.
  
     0.481
AEF83557.1
Glycosyltransferase family 1, candidate beta-glycosyltransferase; Identified by match to protein family HMM PF03033.
  
     0.465
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.