STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86397.1Conserved hypothetical protein; Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family. (118 aa)    
Predicted Functional Partners:
AEF86913.1
HD domain protein; Identified by match to protein family HMM PF01966.
       0.816
AEF84428.1
FlhB domain protein.
       0.804
AEF85755.1
Mg chelatase-like protein; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.
 
  
 0.740
AEF86400.1
Ggdef domain/hd domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
    0.575
AEF85212.1
Smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
 
    0.504
AEF85617.1
Conserved hypothetical protein.
       0.504
AEF85119.1
Hypothetical protein; Identified by glimmer; putative.
   
    0.470
AEF85589.1
Conserved hypothetical protein.
 
    0.467
AEF86582.1
Peptidase, M22 family; Identified by match to protein family HMM PF00814.
 
     0.446
AEF86992.1
Putative ComE protein; Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
  
    0.434
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.