STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84829.1Conserved hypothetical protein; Identified by match to protein family HMM PF02518. (395 aa)    
Predicted Functional Partners:
AEF85663.1
Two component transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.957
AEF86421.1
Transcriptional regulatory protein DegU; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.861
AEF86356.1
Two component transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.861
AEF84713.1
Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.861
AEF85444.1
Two component transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281.
 
 
 0.861
AEF86128.1
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.861
AEF86410.1
Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.861
AEF84399.1
Two component transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281.
 
 
 0.860
AEF85997.1
ExpA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 
 0.860
AEF86479.1
Sigma-70, region 4 family; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281.
 
 
 0.857
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.