STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85751.1Identified by match to protein family HMM PF01297. (325 aa)    
Predicted Functional Partners:
AEF85208.1
Zinc import ATP-binding protein ZnuC; Identified by match to protein family HMM PF00005.
 
 
 0.999
AEF84105.1
ABC-type transport system, permease component; Identified by match to protein family HMM PF00950; match to protein family HMM PF01032.
 
 
 0.998
AEF85280.1
Putative acyltransferase domain protein.
     
 0.781
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.699
rpmB
Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.692
AEF84391.1
Cobalamin synthesis protein/P47K family protein; Identified by match to protein family HMM PF02492.
  
  
 0.680
AEF83532.1
Cobalamin synthesis protein CobW; Identified by match to protein family HMM PF02492.
  
  
 0.680
AEF84933.1
Manganese-dependent transcription regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF01325; match to protein family HMM PF02742.
  
  
 0.517
AEF86460.1
Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.
     
 0.510
AEF83906.1
Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
  
  
 0.470
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.