STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84105.1ABC-type transport system, permease component; Identified by match to protein family HMM PF00950; match to protein family HMM PF01032. (281 aa)    
Predicted Functional Partners:
AEF85208.1
Zinc import ATP-binding protein ZnuC; Identified by match to protein family HMM PF00005.
 
 0.999
AEF85751.1
Identified by match to protein family HMM PF01297.
 
 
 0.998
AEF85280.1
Putative acyltransferase domain protein.
     
 0.779
AEF83906.1
Ferric uptake regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family.
  
  
 0.580
AEF84933.1
Manganese-dependent transcription regulator; Identified by match to protein family HMM PF01022; match to protein family HMM PF01325; match to protein family HMM PF02742.
  
  
 0.551
AEF87033.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
     
 0.464
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
   
  
 0.435
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
   
 0.417
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.
    
 0.414
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.