Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83638.1 | AEF84128.1 | TREPR_2549 | TREPR_3193 | Conserved hypothetical protein. | Putative ResB family protein. | 0.558 |
| AEF83638.1 | AEF85403.1 | TREPR_2549 | TREPR_2296 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.725 |
| AEF83862.1 | AEF84128.1 | TREPR_3194 | TREPR_3193 | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Putative ResB family protein. | 0.773 |
| AEF83862.1 | AEF84959.1 | TREPR_3194 | TREPR_3197 | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Identified by match to protein family HMM PF04199. | 0.535 |
| AEF83862.1 | AEF85279.1 | TREPR_3194 | TREPR_3192 | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Identified by match to protein family HMM PF01578. | 0.774 |
| AEF83862.1 | AEF86851.1 | TREPR_3194 | TREPR_3195 | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF83862.1 | htpG | TREPR_3194 | TREPR_3196 | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.687 |
| AEF84128.1 | AEF83638.1 | TREPR_3193 | TREPR_2549 | Putative ResB family protein. | Conserved hypothetical protein. | 0.558 |
| AEF84128.1 | AEF83862.1 | TREPR_3193 | TREPR_3194 | Putative ResB family protein. | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.773 |
| AEF84128.1 | AEF84959.1 | TREPR_3193 | TREPR_3197 | Putative ResB family protein. | Identified by match to protein family HMM PF04199. | 0.527 |
| AEF84128.1 | AEF85195.1 | TREPR_3193 | TREPR_0187 | Putative ResB family protein. | Identified by match to protein family HMM TIGR01552. | 0.539 |
| AEF84128.1 | AEF85279.1 | TREPR_3193 | TREPR_3192 | Putative ResB family protein. | Identified by match to protein family HMM PF01578. | 0.974 |
| AEF84128.1 | AEF85381.1 | TREPR_3193 | TREPR_0261 | Putative ResB family protein. | uroporphyrinogen-III synthase/methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469. | 0.851 |
| AEF84128.1 | AEF85403.1 | TREPR_3193 | TREPR_2296 | Putative ResB family protein. | Conserved hypothetical protein. | 0.525 |
| AEF84128.1 | AEF86177.1 | TREPR_3193 | TREPR_0230 | Putative ResB family protein. | Identified by match to protein family HMM PF02683. | 0.591 |
| AEF84128.1 | AEF86851.1 | TREPR_3193 | TREPR_3195 | Putative ResB family protein. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84128.1 | htpG | TREPR_3193 | TREPR_3196 | Putative ResB family protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.537 |
| AEF84959.1 | AEF83862.1 | TREPR_3197 | TREPR_3194 | Identified by match to protein family HMM PF04199. | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.535 |
| AEF84959.1 | AEF84128.1 | TREPR_3197 | TREPR_3193 | Identified by match to protein family HMM PF04199. | Putative ResB family protein. | 0.527 |
| AEF84959.1 | AEF85279.1 | TREPR_3197 | TREPR_3192 | Identified by match to protein family HMM PF04199. | Identified by match to protein family HMM PF01578. | 0.527 |
page 1 of 3