STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85090.1Conserved hypothetical protein; Identified by match to protein family HMM PF00733; match to protein family HMM TIGR00268. (276 aa)    
Predicted Functional Partners:
AEF85337.1
Phosphoribosylaminoimidazole carboxylase ncair mutase subunit.
 
 
 0.995
AEF86449.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family.
 
 0.992
AEF85301.1
General glycosylation pathway protein.
 
  
 0.877
AEF85032.1
Cobalamin; Identified by match to protein family HMM PF01891.
 
    0.825
AEF84144.1
Conserved hypothetical protein.
 
  
 0.724
AEF83677.1
Endonuclease III protein; Identified by match to protein family HMM PF00633; match to protein family HMM PF00730.
 
    0.663
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
   
    0.551
AEF84715.1
Hypothetical protein; Identified by glimmer; putative.
       0.528
AEF84824.1
Abc transporter integral membrane protein; Identified by match to protein family HMM PF00528.
  
    0.422
AEF85869.1
Thiamine-binding periplasmic protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01254.
       0.412
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.