Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83644.1 | AEF83789.1 | TREPR_0658 | TREPR_1982 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | 0.857 |
| AEF83644.1 | AEF84254.1 | TREPR_0658 | TREPR_3221 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005. | 0.430 |
| AEF83644.1 | AEF84461.1 | TREPR_0658 | TREPR_1526 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | 0.566 |
| AEF83644.1 | AEF84731.1 | TREPR_0658 | TREPR_3035 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.856 |
| AEF83644.1 | AEF84824.1 | TREPR_0658 | TREPR_3220 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Abc transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.645 |
| AEF83644.1 | AEF84904.1 | TREPR_0658 | TREPR_0657 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | 0.939 |
| AEF83644.1 | AEF85620.1 | TREPR_0658 | TREPR_1511 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Putative ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547. | 0.856 |
| AEF83644.1 | AEF85869.1 | TREPR_0658 | TREPR_3219 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Thiamine-binding periplasmic protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01254. | 0.703 |
| AEF83644.1 | AEF86121.1 | TREPR_0658 | TREPR_0283 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | Putative iron ABC transporter, solute-binding lipoprotein; Identified by match to protein family HMM PF01547. | 0.861 |
| AEF83789.1 | AEF83644.1 | TREPR_1982 | TREPR_0658 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | 0.857 |
| AEF83789.1 | AEF84461.1 | TREPR_1982 | TREPR_1526 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547. | 0.926 |
| AEF83789.1 | AEF84731.1 | TREPR_1982 | TREPR_3035 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.928 |
| AEF83789.1 | AEF84824.1 | TREPR_1982 | TREPR_3220 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Abc transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.683 |
| AEF83789.1 | AEF84904.1 | TREPR_1982 | TREPR_0657 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | 0.921 |
| AEF83789.1 | AEF85620.1 | TREPR_1982 | TREPR_1511 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Putative ABC transporter, substrate binding protein; Identified by match to protein family HMM PF01547. | 0.927 |
| AEF83789.1 | AEF85869.1 | TREPR_1982 | TREPR_3219 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Thiamine-binding periplasmic protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01254. | 0.614 |
| AEF83789.1 | AEF86121.1 | TREPR_1982 | TREPR_0283 | Iron ABC transporter substrate-binding protein; Identified by match to protein family HMM PF01547. | Putative iron ABC transporter, solute-binding lipoprotein; Identified by match to protein family HMM PF01547. | 0.929 |
| AEF84254.1 | AEF83644.1 | TREPR_3221 | TREPR_0658 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005. | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00528. | 0.430 |
| AEF84254.1 | AEF84715.1 | TREPR_3221 | TREPR_3218 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by glimmer; putative. | 0.586 |
| AEF84254.1 | AEF84824.1 | TREPR_3221 | TREPR_3220 | Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005. | Abc transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.879 |
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