STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84254.1Fe(3+) ions import ATP-binding protein FbpC; Identified by match to protein family HMM PF00005. (356 aa)    
Predicted Functional Partners:
AEF85103.1
Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547.
 
  
 0.904
AEF84824.1
Abc transporter integral membrane protein; Identified by match to protein family HMM PF00528.
 
  
 0.879
AEF83583.1
PotB protein; Identified by match to protein family HMM PF00528.
 
 
 0.833
AEF84228.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.821
AEF85869.1
Thiamine-binding periplasmic protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01254.
     
 0.808
AEF85736.1
Spermidine/putrescine transport system permease protein PotB; Identified by match to protein family HMM PF00528.
 
 
 0.802
AEF84503.1
Spermidine/putrescine transport system permease protein PotB; Identified by match to protein family HMM PF00528.
 
 0.770
AEF83757.1
Spermidine/putrescine transport system permease protein PotC; Identified by match to protein family HMM PF00528.
 
  
 0.716
AEF85796.1
Ornithine carbamoyltransferase; Identified by match to protein family HMM PF00528.
  
 0.698
AEF86598.1
Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547.
 
  
 0.681
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.