Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF83698.1 | AEF83895.1 | TREPR_3256 | TREPR_3260 | Smr domain protein; Identified by match to protein family HMM PF01713. | VWA domain protein; Identified by match to protein family HMM PF00092. | 0.508 |
AEF83698.1 | AEF84239.1 | TREPR_3256 | TREPR_3258 | Smr domain protein; Identified by match to protein family HMM PF01713. | Putative lipoprotein. | 0.545 |
AEF83698.1 | AEF84305.1 | TREPR_3256 | TREPR_3263 | Smr domain protein; Identified by match to protein family HMM PF01713. | Conserved hypothetical protein; Identified by match to protein family HMM PF01882. | 0.547 |
AEF83698.1 | AEF84678.1 | TREPR_3256 | TREPR_3261 | Smr domain protein; Identified by match to protein family HMM PF01713. | Von Willebrand factor, type A; Identified by match to protein family HMM PF00092. | 0.547 |
AEF83698.1 | AEF84823.1 | TREPR_3256 | TREPR_3257 | Smr domain protein; Identified by match to protein family HMM PF01713. | Hypothetical protein; Identified by glimmer; putative. | 0.741 |
AEF83698.1 | AEF85341.1 | TREPR_3256 | TREPR_3262 | Smr domain protein; Identified by match to protein family HMM PF01713. | Hypothetical protein; Identified by glimmer; putative. | 0.533 |
AEF83698.1 | AEF85930.1 | TREPR_3256 | TREPR_3265 | Smr domain protein; Identified by match to protein family HMM PF01713. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.448 |
AEF83698.1 | moxR | TREPR_3256 | TREPR_3264 | Smr domain protein; Identified by match to protein family HMM PF01713. | ATPase, MoxR family; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.541 |
AEF83895.1 | AEF83698.1 | TREPR_3260 | TREPR_3256 | VWA domain protein; Identified by match to protein family HMM PF00092. | Smr domain protein; Identified by match to protein family HMM PF01713. | 0.508 |
AEF83895.1 | AEF84239.1 | TREPR_3260 | TREPR_3258 | VWA domain protein; Identified by match to protein family HMM PF00092. | Putative lipoprotein. | 0.808 |
AEF83895.1 | AEF84305.1 | TREPR_3260 | TREPR_3263 | VWA domain protein; Identified by match to protein family HMM PF00092. | Conserved hypothetical protein; Identified by match to protein family HMM PF01882. | 0.959 |
AEF83895.1 | AEF84412.1 | TREPR_3260 | TREPR_0178 | VWA domain protein; Identified by match to protein family HMM PF00092. | ATPase, AAA family; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.473 |
AEF83895.1 | AEF84678.1 | TREPR_3260 | TREPR_3261 | VWA domain protein; Identified by match to protein family HMM PF00092. | Von Willebrand factor, type A; Identified by match to protein family HMM PF00092. | 0.954 |
AEF83895.1 | AEF84823.1 | TREPR_3260 | TREPR_3257 | VWA domain protein; Identified by match to protein family HMM PF00092. | Hypothetical protein; Identified by glimmer; putative. | 0.450 |
AEF83895.1 | AEF85341.1 | TREPR_3260 | TREPR_3262 | VWA domain protein; Identified by match to protein family HMM PF00092. | Hypothetical protein; Identified by glimmer; putative. | 0.804 |
AEF83895.1 | AEF85930.1 | TREPR_3260 | TREPR_3265 | VWA domain protein; Identified by match to protein family HMM PF00092. | Aspartate aminotransferase; Identified by match to protein family HMM PF00155. | 0.553 |
AEF83895.1 | moxR | TREPR_3260 | TREPR_3264 | VWA domain protein; Identified by match to protein family HMM PF00092. | ATPase, MoxR family; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.928 |
AEF84239.1 | AEF83698.1 | TREPR_3258 | TREPR_3256 | Putative lipoprotein. | Smr domain protein; Identified by match to protein family HMM PF01713. | 0.545 |
AEF84239.1 | AEF83895.1 | TREPR_3258 | TREPR_3260 | Putative lipoprotein. | VWA domain protein; Identified by match to protein family HMM PF00092. | 0.808 |
AEF84239.1 | AEF84305.1 | TREPR_3258 | TREPR_3263 | Putative lipoprotein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01882. | 0.829 |
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