STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86673.1Nickel import ATP-binding protein NikE; Identified by match to protein family HMM PF00005. (223 aa)    
Predicted Functional Partners:
AEF86305.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.965
AEF86943.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.956
AEF84386.1
Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496.
 
  
 0.952
AEF85945.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
   
0.914
AEF84113.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.714
AEF86186.1
Identified by match to protein family HMM PF02663.
 
     0.691
AEF85411.1
Fe3+-siderophore ABC transporter, periplasmic Fe3+-siderophore-binding protein; Identified by match to protein family HMM PF01497.
 
    0.672
AEF83873.1
Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005.
 
    
0.660
AEF86998.1
Glutathione import ATP-binding protein GsiA; Identified by match to protein family HMM PF00005.
    0.633
AEF85907.1
Transport system permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.615
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.