Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83873.1 | AEF84386.1 | TREPR_3271 | TREPR_3270 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | 0.615 |
| AEF83873.1 | AEF85411.1 | TREPR_3271 | TREPR_3273 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | Fe3+-siderophore ABC transporter, periplasmic Fe3+-siderophore-binding protein; Identified by match to protein family HMM PF01497. | 0.968 |
| AEF83873.1 | AEF85907.1 | TREPR_3271 | TREPR_3272 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | Transport system permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.974 |
| AEF83873.1 | AEF85945.1 | TREPR_3271 | TREPR_3267 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.645 |
| AEF83873.1 | AEF86186.1 | TREPR_3271 | TREPR_3274 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | Identified by match to protein family HMM PF02663. | 0.890 |
| AEF83873.1 | AEF86305.1 | TREPR_3271 | TREPR_3268 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.615 |
| AEF83873.1 | AEF86673.1 | TREPR_3271 | TREPR_3266 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | Nickel import ATP-binding protein NikE; Identified by match to protein family HMM PF00005. | 0.660 |
| AEF83873.1 | AEF86943.1 | TREPR_3271 | TREPR_3269 | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.615 |
| AEF83953.1 | AEF84386.1 | TREPR_1784 | TREPR_3270 | Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528. | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | 0.461 |
| AEF83953.1 | AEF85945.1 | TREPR_1784 | TREPR_3267 | Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.515 |
| AEF83953.1 | AEF86673.1 | TREPR_1784 | TREPR_3266 | Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528. | Nickel import ATP-binding protein NikE; Identified by match to protein family HMM PF00005. | 0.495 |
| AEF83953.1 | AEF86943.1 | TREPR_1784 | TREPR_3269 | Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.786 |
| AEF84386.1 | AEF83873.1 | TREPR_3270 | TREPR_3271 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. | 0.615 |
| AEF84386.1 | AEF83953.1 | TREPR_3270 | TREPR_1784 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528. | 0.461 |
| AEF84386.1 | AEF85411.1 | TREPR_3270 | TREPR_3273 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Fe3+-siderophore ABC transporter, periplasmic Fe3+-siderophore-binding protein; Identified by match to protein family HMM PF01497. | 0.616 |
| AEF84386.1 | AEF85836.1 | TREPR_3270 | TREPR_0826 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528. | 0.466 |
| AEF84386.1 | AEF85907.1 | TREPR_3270 | TREPR_3272 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Transport system permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.615 |
| AEF84386.1 | AEF85945.1 | TREPR_3270 | TREPR_3267 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.953 |
| AEF84386.1 | AEF86186.1 | TREPR_3270 | TREPR_3274 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | Identified by match to protein family HMM PF02663. | 0.669 |
| AEF84386.1 | AEF86305.1 | TREPR_3270 | TREPR_3268 | Peptide/opine/nickel ABC transporter; Identified by match to protein family HMM PF00496. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.958 |
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