Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84039.1 | AEF84053.1 | TREPR_3277 | TREPR_3281 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | Conserved hypothetical protein. | 0.504 |
| AEF84039.1 | AEF84381.1 | TREPR_3277 | TREPR_3275 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005. | 0.961 |
| AEF84039.1 | AEF84578.1 | TREPR_3277 | TREPR_3280 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | Methyltransferase type 11; Identified by match to protein family HMM PF08241. | 0.485 |
| AEF84039.1 | AEF85022.1 | TREPR_3277 | TREPR_3278 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.762 |
| AEF84039.1 | AEF85411.1 | TREPR_3277 | TREPR_3273 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | Fe3+-siderophore ABC transporter, periplasmic Fe3+-siderophore-binding protein; Identified by match to protein family HMM PF01497. | 0.645 |
| AEF84039.1 | AEF86186.1 | TREPR_3277 | TREPR_3274 | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | Identified by match to protein family HMM PF02663. | 0.637 |
| AEF84053.1 | AEF84039.1 | TREPR_3281 | TREPR_3277 | Conserved hypothetical protein. | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | 0.504 |
| AEF84053.1 | AEF84381.1 | TREPR_3281 | TREPR_3275 | Conserved hypothetical protein. | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005. | 0.470 |
| AEF84053.1 | AEF84578.1 | TREPR_3281 | TREPR_3280 | Conserved hypothetical protein. | Methyltransferase type 11; Identified by match to protein family HMM PF08241. | 0.856 |
| AEF84053.1 | AEF85022.1 | TREPR_3281 | TREPR_3278 | Conserved hypothetical protein. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.538 |
| AEF84053.1 | AEF85349.1 | TREPR_3281 | TREPR_3132 | Conserved hypothetical protein. | Cobyrinic Acid a,c-diamide synthase; Identified by match to protein family HMM PF01656. | 0.423 |
| AEF84053.1 | AEF85411.1 | TREPR_3281 | TREPR_3273 | Conserved hypothetical protein. | Fe3+-siderophore ABC transporter, periplasmic Fe3+-siderophore-binding protein; Identified by match to protein family HMM PF01497. | 0.553 |
| AEF84053.1 | AEF86186.1 | TREPR_3281 | TREPR_3274 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02663. | 0.612 |
| AEF84053.1 | AEF86372.1 | TREPR_3281 | TREPR_0575 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.420 |
| AEF84053.1 | AEF86593.1 | TREPR_3281 | TREPR_0847 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.458 |
| AEF84053.1 | AEF87044.1 | TREPR_3281 | TREPR_2899 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. | 0.455 |
| AEF84381.1 | AEF84039.1 | TREPR_3275 | TREPR_3277 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005. | Periplasmic binding protein; Identified by match to protein family HMM PF01497. | 0.961 |
| AEF84381.1 | AEF84053.1 | TREPR_3275 | TREPR_3281 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.470 |
| AEF84381.1 | AEF84578.1 | TREPR_3275 | TREPR_3280 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005. | Methyltransferase type 11; Identified by match to protein family HMM PF08241. | 0.445 |
| AEF84381.1 | AEF85022.1 | TREPR_3275 | TREPR_3278 | iron(III) dicitrate transport ATP-binding protein FecE; Identified by match to protein family HMM PF00005. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.747 |
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