Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cbiQCobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454. (272 aa)    
Predicted Functional Partners:
AEF86585.1
Cobalt import ATP-binding protein CbiO 2; Identified by match to protein family HMM PF00005.
 
 0.998
AEF85032.1
Cobalamin; Identified by match to protein family HMM PF01891.
 
 
 0.995
AEF84967.1
Cobalt import ATP-binding protein CbiO 2; Identified by match to protein family HMM PF00005.
 
 0.921
AEF85132.1
Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.820
AEF85665.1
Glutathione import ATP-binding protein GsiA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528.
  
 
 0.731
AEF84324.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07155.
  
 
 0.671
AEF86059.1
Precorrin-6y C5,15-methyltransferase (decarboxylating); Identified by match to protein family HMM PF00590; match to protein family HMM PF03602; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469.
  
  
 0.533
truA
tRNA pseudouridine synthase A (tRNA-uridine isomeraseI) (tRNA pseudouridylate synthase I) (PSU-I); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.506
AEF86230.1
Identified by match to protein family HMM PF01061.
 
  
  0.498
AEF85495.1
CbiG; Identified by match to protein family HMM PF01890.
  
  
 0.466
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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