STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84931.1Identified by match to protein family HMM PF00939; match to protein family HMM PF03600. (424 aa)    
Predicted Functional Partners:
AEF84803.1
Bacterial capsule synthesis protein; Identified by match to protein family HMM PF09587.
       0.704
citD_1
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
  
  
 0.610
citE
Citrate (pro-3S)-lyase, beta subunit; Identified by match to protein family HMM PF03328; match to protein family HMM TIGR01588; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.608
citF_1
Citrate lyase, alpha subunit; Identified by match to protein family HMM PF04223; match to protein family HMM TIGR01584.
  
    0.592
citG
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; Identified by match to protein family HMM PF01874; match to protein family HMM PF03802; match to protein family HMM TIGR03124.
  
  
 0.584
AEF84129.1
Identified by match to protein family HMM PF00330; match to protein family HMM PF00694.
  
  
 0.566
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
  
  
 0.555
AEF85475.1
3-methylitaconate isomerase; Identified by match to protein family HMM PF04303.
  
    0.524
AEF85486.1
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
 
   
 0.517
AEF84620.1
Trk system potassium uptake protein TrkA; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254.
 
  
 0.463
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.