Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84301.1 | AEF84471.1 | TREPR_3340 | TREPR_3336 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | 0.568 |
| AEF84301.1 | AEF85037.1 | TREPR_3340 | TREPR_3338 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | 0.932 |
| AEF84301.1 | AEF85497.1 | TREPR_3340 | TREPR_3337 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | 0.988 |
| AEF84301.1 | AEF86485.1 | TREPR_3340 | TREPR_3339 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | 0.967 |
| AEF84471.1 | AEF84301.1 | TREPR_3336 | TREPR_3340 | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.568 |
| AEF84471.1 | AEF85037.1 | TREPR_3336 | TREPR_3338 | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | 0.757 |
| AEF84471.1 | AEF85497.1 | TREPR_3336 | TREPR_3337 | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | 0.757 |
| AEF84471.1 | AEF86485.1 | TREPR_3336 | TREPR_3339 | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | 0.664 |
| AEF84471.1 | recX | TREPR_3336 | TREPR_2983 | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | Putative RecA regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.414 |
| AEF85037.1 | AEF84301.1 | TREPR_3338 | TREPR_3340 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.932 |
| AEF85037.1 | AEF84471.1 | TREPR_3338 | TREPR_3336 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | 0.757 |
| AEF85037.1 | AEF85497.1 | TREPR_3338 | TREPR_3337 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | 0.994 |
| AEF85037.1 | AEF86485.1 | TREPR_3338 | TREPR_3339 | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | 0.966 |
| AEF85497.1 | AEF84301.1 | TREPR_3337 | TREPR_3340 | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.988 |
| AEF85497.1 | AEF84471.1 | TREPR_3337 | TREPR_3336 | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | 0.757 |
| AEF85497.1 | AEF85037.1 | TREPR_3337 | TREPR_3338 | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | 0.994 |
| AEF85497.1 | AEF86485.1 | TREPR_3337 | TREPR_3339 | L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005. | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | 0.962 |
| AEF86485.1 | AEF84301.1 | TREPR_3339 | TREPR_3340 | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.967 |
| AEF86485.1 | AEF84471.1 | TREPR_3339 | TREPR_3336 | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | Conserved hypothetical protein; Identified by match to protein family HMM PF05147. | 0.664 |
| AEF86485.1 | AEF85037.1 | TREPR_3339 | TREPR_3338 | Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497. | ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528. | 0.966 |
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