STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85096.1Antibiotic biosynthesis monooxygenase; Identified by match to protein family HMM PF03992. (105 aa)    
Predicted Functional Partners:
AEF85058.1
Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.
  
     0.555
AEF86635.1
Conserved hypothetical protein.
 
    0.504
AEF83614.1
Deoxyribose-phosphate aldolase superfamily; Identified by match to protein family HMM PF01791.
  
  
 0.501
AEF84476.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05147.
       0.492
AEF85873.1
ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528.
  
    0.479
AEF85700.1
L-cystine import ATP-binding protein TcyN; Identified by match to protein family HMM PF00005.
       0.477
AEF84301.1
ABC-type amino acid transport system, permease component; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
    0.471
AEF85584.1
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
 
    0.457
AEF86485.1
Bacterial extracellular solute-binding protein, family 3; Identified by match to protein family HMM PF00497.
  
    0.413
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.