STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85997.1ExpA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (206 aa)    
Predicted Functional Partners:
AEF84218.1
Two-component system sensor kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 
 0.967
AEF85439.1
Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196.
  
  
  0.964
AEF86144.1
Sensory transduction histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF01814; match to protein family HMM PF02518; match to protein family HMM TIGR02481.
  
 
 0.882
AEF86251.1
Sensory transduction histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518.
  
 
 0.882
AEF85767.1
Multi-sensor signal transduction histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 
 0.876
AEF85803.1
MmoS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF02743.
 
 
 0.864
AEF84829.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02518.
 
 
 0.860
AEF85340.1
Putative signal transduction histidine kinase; Identified by match to protein family HMM PF02518.
 
 
 0.856
AEF85241.1
Two-component system sensor kinase; Identified by match to protein family HMM PF02518.
 
 
 0.856
AEF85912.1
PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
  
 
 0.847
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.