Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84225.1 | AEF84486.1 | TREPR_0775 | TREPR_0471 | Multiphosphoryl transfer protein 1 (MTP 1). | Conserved hypothetical protein; Identified by match to protein family HMM PF01182. | 0.482 |
| AEF84225.1 | AEF85103.1 | TREPR_0775 | TREPR_1465 | Multiphosphoryl transfer protein 1 (MTP 1). | Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547. | 0.450 |
| AEF84225.1 | AEF86532.1 | TREPR_0775 | TREPR_2954 | Multiphosphoryl transfer protein 1 (MTP 1). | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.995 |
| AEF84225.1 | nagA | TREPR_0775 | TREPR_3359 | Multiphosphoryl transfer protein 1 (MTP 1). | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.521 |
| AEF84225.1 | nagB | TREPR_0775 | TREPR_3358 | Multiphosphoryl transfer protein 1 (MTP 1). | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.482 |
| AEF84486.1 | AEF84225.1 | TREPR_0471 | TREPR_0775 | Conserved hypothetical protein; Identified by match to protein family HMM PF01182. | Multiphosphoryl transfer protein 1 (MTP 1). | 0.482 |
| AEF84486.1 | AEF86532.1 | TREPR_0471 | TREPR_2954 | Conserved hypothetical protein; Identified by match to protein family HMM PF01182. | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.774 |
| AEF84486.1 | nagA | TREPR_0471 | TREPR_3359 | Conserved hypothetical protein; Identified by match to protein family HMM PF01182. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.981 |
| AEF84644.1 | glmS | TREPR_1339 | TREPR_1116 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.916 |
| AEF84644.1 | nagA | TREPR_1339 | TREPR_3359 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.922 |
| AEF84644.1 | nagB | TREPR_1339 | TREPR_3358 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.918 |
| AEF85103.1 | AEF84225.1 | TREPR_1465 | TREPR_0775 | Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547. | Multiphosphoryl transfer protein 1 (MTP 1). | 0.450 |
| AEF85103.1 | AEF86532.1 | TREPR_1465 | TREPR_2954 | Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547. | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.408 |
| AEF85103.1 | nagA | TREPR_1465 | TREPR_3359 | Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.414 |
| AEF85589.1 | nagA | TREPR_2628 | TREPR_3359 | Conserved hypothetical protein. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.776 |
| AEF86532.1 | AEF84225.1 | TREPR_2954 | TREPR_0775 | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | Multiphosphoryl transfer protein 1 (MTP 1). | 0.995 |
| AEF86532.1 | AEF84486.1 | TREPR_2954 | TREPR_0471 | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | Conserved hypothetical protein; Identified by match to protein family HMM PF01182. | 0.774 |
| AEF86532.1 | AEF85103.1 | TREPR_2954 | TREPR_1465 | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | Spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547. | 0.408 |
| AEF86532.1 | glmS | TREPR_2954 | TREPR_1116 | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.529 |
| AEF86532.1 | nagA | TREPR_2954 | TREPR_3359 | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.669 |
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