STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86861.1Oxidoreductase domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. (389 aa)    
Predicted Functional Partners:
AEF84742.1
Probable malonic semialdehyde oxidative decarboxylase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
 
  
 0.889
AEF85292.1
Myo-inositol catabolism protein IolE; Identified by match to protein family HMM PF01261.
  
 0.850
AEF84724.1
Myo-inositol catabolism protein; Identified by match to protein family HMM PF06845.
 
  
 0.841
AEF84999.1
Inositol 2-dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447.
  
     0.674
AEF83751.1
Inositol 2-dehydrogenase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
     0.673
AEF85819.1
Identified by match to protein family HMM PF01261.
 
  
 0.653
AEF83769.1
Biopolymer transport protein; Identified by match to protein family HMM PF01618.
     
 0.624
AEF84554.1
TonB protein; Identified by match to protein family HMM TIGR01352.
     
 0.616
AEF85743.1
Hypothetical protein; Identified by glimmer; putative.
       0.613
AEF85230.1
Hypothetical protein; Identified by glimmer; putative.
       0.613
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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