STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86996.1Identified by match to protein family HMM PF00691. (400 aa)    
Predicted Functional Partners:
AEF86577.1
Identified by match to protein family HMM PF00691.
  
     0.714
AEF85932.1
Identified by match to protein family HMM PF00691.
  
     0.640
AEF85963.1
Putative trep.
 
 
 0.605
AEF85015.1
Transglycosylase, SLT family; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476.
 
 
 
 0.578
AEF83633.1
Putative LysM domain protein; Identified by match to protein family HMM PF01476.
 
  
 0.573
AEF86071.1
Hypothetical protein; Identified by glimmer; putative.
       0.564
yaeT
Outer membrane protein assembly complex, YaeT protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM PF08479; match to protein family HMM TIGR03303.
  
 
 0.555
AEF85797.1
Putative cyclic nucleotide-binding protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00515.
 
  
 0.552
AEF84659.1
Cationic outer membrane protein; Identified by match to protein family HMM PF03938.
 
 
 0.532
AEF84757.1
Putative outer membrane protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
   
 0.479
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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