STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85528.1Conserved hypothetical protein. (556 aa)    
Predicted Functional Partners:
AEF83746.1
Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639.
 
 
   0.922
flgL
Flagellar hook-associated protein 3; Identified by match to protein family HMM PF00669; match to protein family HMM PF07196; match to protein family HMM TIGR02550.
 
 
 0.797
AEF84981.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
     0.770
AEF85932.1
Identified by match to protein family HMM PF00691.
  
 
   0.767
AEF83912.1
22.5 kDa protein.
  
     0.763
AEF83563.1
Conserved hypothetical protein.
  
     0.760
AEF85390.1
Conserved hypothetical protein.
  
     0.759
AEF83657.1
Conserved hypothetical protein.
  
     0.755
AEF86579.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
     0.750
AEF85896.1
Fibronectin type III domain protein; Identified by match to protein family HMM PF00041.
  
     0.744
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.