Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF85163.1Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. (212 aa)    
Predicted Functional Partners:
AEF84729.1
Methionine synthase; Identified by match to protein family HMM PF00809.
    0.976
AEF85264.1
Methyl corrinoid protein; Identified by match to protein family HMM PF00809.
    0.974
AEF86717.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
     0.751
AEF86346.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
     0.748
AEF84592.1
Ferredoxin; Identified by match to protein family HMM PF00111.
 
    0.731
AEF85965.1
Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809.
    0.594
AEF85963.1
Putative trep.
       0.568
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
   0.522
AEF83806.1
Ferredoxin; Identified by match to protein family HMM PF00111.
 
    0.508
AEF86807.1
Uroporphyrinogen decarboxylase (URO-D) superfamily; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.490
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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