Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83806.1 | AEF84729.1 | TREPR_3071 | TREPR_2898 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methionine synthase; Identified by match to protein family HMM PF00809. | 0.447 |
| AEF83806.1 | AEF85163.1 | TREPR_3071 | TREPR_3402 | Ferredoxin; Identified by match to protein family HMM PF00111. | Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.475 |
| AEF83806.1 | AEF85264.1 | TREPR_3071 | TREPR_1556 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.594 |
| AEF83806.1 | AEF85965.1 | TREPR_3071 | TREPR_3064 | Ferredoxin; Identified by match to protein family HMM PF00111. | Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809. | 0.818 |
| AEF83806.1 | AEF86807.1 | TREPR_3071 | TREPR_2998 | Ferredoxin; Identified by match to protein family HMM PF00111. | Uroporphyrinogen decarboxylase (URO-D) superfamily; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | 0.560 |
| AEF83806.1 | metH | TREPR_3071 | TREPR_0120 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.462 |
| AEF84592.1 | AEF84729.1 | TREPR_1553 | TREPR_2898 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methionine synthase; Identified by match to protein family HMM PF00809. | 0.427 |
| AEF84592.1 | AEF85163.1 | TREPR_1553 | TREPR_3402 | Ferredoxin; Identified by match to protein family HMM PF00111. | Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.713 |
| AEF84592.1 | AEF85264.1 | TREPR_1553 | TREPR_1556 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.672 |
| AEF84592.1 | AEF85965.1 | TREPR_1553 | TREPR_3064 | Ferredoxin; Identified by match to protein family HMM PF00111. | Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809. | 0.512 |
| AEF84592.1 | AEF86346.1 | TREPR_1553 | TREPR_3403 | Ferredoxin; Identified by match to protein family HMM PF00111. | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. | 0.428 |
| AEF84592.1 | AEF86717.1 | TREPR_1553 | TREPR_3404 | Ferredoxin; Identified by match to protein family HMM PF00111. | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. | 0.427 |
| AEF84592.1 | AEF86807.1 | TREPR_1553 | TREPR_2998 | Ferredoxin; Identified by match to protein family HMM PF00111. | Uroporphyrinogen decarboxylase (URO-D) superfamily; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. | 0.716 |
| AEF84592.1 | metH | TREPR_1553 | TREPR_0120 | Ferredoxin; Identified by match to protein family HMM PF00111. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.462 |
| AEF84729.1 | AEF83806.1 | TREPR_2898 | TREPR_3071 | Methionine synthase; Identified by match to protein family HMM PF00809. | Ferredoxin; Identified by match to protein family HMM PF00111. | 0.447 |
| AEF84729.1 | AEF84592.1 | TREPR_2898 | TREPR_1553 | Methionine synthase; Identified by match to protein family HMM PF00809. | Ferredoxin; Identified by match to protein family HMM PF00111. | 0.427 |
| AEF84729.1 | AEF85163.1 | TREPR_2898 | TREPR_3402 | Methionine synthase; Identified by match to protein family HMM PF00809. | Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.977 |
| AEF84729.1 | AEF85264.1 | TREPR_2898 | TREPR_1556 | Methionine synthase; Identified by match to protein family HMM PF00809. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.912 |
| AEF84729.1 | AEF85965.1 | TREPR_2898 | TREPR_3064 | Methionine synthase; Identified by match to protein family HMM PF00809. | Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809. | 0.922 |
| AEF84729.1 | metH | TREPR_2898 | TREPR_0120 | Methionine synthase; Identified by match to protein family HMM PF00809. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.577 |
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