STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85394.1Site-specific DNA-methyltransferase (adenine-specific); Identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571. (285 aa)    
Predicted Functional Partners:
AEF83824.1
DNA polymerase, beta domain protein region; Identified by match to protein family HMM PF01909.
       0.773
AEF84152.1
Hepn domain protein; Identified by match to protein family HMM PF05168.
       0.773
AEF85639.1
Aldo/keto reductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00248.
       0.697
AEF86564.1
Hypothetical protein; Identified by glimmer; putative.
       0.587
AEF84163.1
D12 class N6 adenine-specific DNA methyltransferase; Identified by match to protein family HMM PF02086.
 
   
 0.441
putP
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.435
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.429
AEF84895.1
N-6 DNA methylase; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313.
 
   
 0.416
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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