STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86999.1Caax amino protease family; Identified by match to protein family HMM PF02517. (224 aa)    
Predicted Functional Partners:
AEF86230.1
Identified by match to protein family HMM PF01061.
  
  
 0.735
AEF85949.1
Type IV pilus assembly protein PilZ; Identified by match to protein family HMM PF07238.
       0.566
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
    0.521
AEF86992.1
Putative ComE protein; Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
       0.514
rluD_1
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.494
AEF85007.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
    0.442
AEF85648.1
Conserved hypothetical protein.
       0.438
AEF86534.1
6,7-dihydropteridine reductase; Identified by match to protein family HMM PF00881.
  
  
 0.404
AEF85622.1
Identified by match to protein family HMM PF00881.
  
  
 0.404
AEF85582.1
Nitroreductase; Identified by match to protein family HMM PF00881.
  
  
 0.404
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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