Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83585.1 | AEF84210.1 | TREPR_2819 | TREPR_0680 | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | Identified by match to protein family HMM PF01048. | 0.905 |
| AEF83585.1 | AEF85387.1 | TREPR_2819 | TREPR_1345 | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | NAD+ synthetase. | 0.470 |
| AEF83585.1 | AEF85412.1 | TREPR_2819 | TREPR_0513 | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | 0.903 |
| AEF83585.1 | AEF86296.1 | TREPR_2819 | TREPR_3492 | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | Pyrazinamidase/nicotinamidase (PZAase)(Nicotine deamidase) (NAMase); Identified by match to protein family HMM PF00857. | 0.925 |
| AEF83585.1 | deoD | TREPR_2819 | TREPR_0918 | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.919 |
| AEF83585.1 | nadE | TREPR_2819 | TREPR_1350 | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | NAD(+) synthase (glutamine-hydrolyzing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.944 |
| AEF83635.1 | AEF84901.1 | TREPR_3297 | TREPR_3491 | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.424 |
| AEF83635.1 | AEF85387.1 | TREPR_3297 | TREPR_1345 | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | NAD+ synthetase. | 0.471 |
| AEF83635.1 | AEF85441.1 | TREPR_3297 | TREPR_3493 | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Putative membrane protein; Identified by match to protein family HMM PF00892. | 0.416 |
| AEF83635.1 | AEF86045.1 | TREPR_3297 | TREPR_3490 | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Identified by match to protein family HMM PF00485. | 0.491 |
| AEF83635.1 | AEF86296.1 | TREPR_3297 | TREPR_3492 | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Pyrazinamidase/nicotinamidase (PZAase)(Nicotine deamidase) (NAMase); Identified by match to protein family HMM PF00857. | 0.490 |
| AEF83635.1 | nadE | TREPR_3297 | TREPR_1350 | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | NAD(+) synthase (glutamine-hydrolyzing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.471 |
| AEF84210.1 | AEF83585.1 | TREPR_0680 | TREPR_2819 | Identified by match to protein family HMM PF01048. | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | 0.905 |
| AEF84210.1 | AEF84901.1 | TREPR_0680 | TREPR_3491 | Identified by match to protein family HMM PF01048. | Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.900 |
| AEF84210.1 | AEF85387.1 | TREPR_0680 | TREPR_1345 | Identified by match to protein family HMM PF01048. | NAD+ synthetase. | 0.440 |
| AEF84210.1 | AEF85412.1 | TREPR_0680 | TREPR_0513 | Identified by match to protein family HMM PF01048. | NAD-dependent deacetylase; Identified by match to protein family HMM PF02146. | 0.905 |
| AEF84210.1 | AEF86296.1 | TREPR_0680 | TREPR_3492 | Identified by match to protein family HMM PF01048. | Pyrazinamidase/nicotinamidase (PZAase)(Nicotine deamidase) (NAMase); Identified by match to protein family HMM PF00857. | 0.905 |
| AEF84210.1 | deoD | TREPR_0680 | TREPR_0918 | Identified by match to protein family HMM PF01048. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.928 |
| AEF84210.1 | nadE | TREPR_0680 | TREPR_1350 | Identified by match to protein family HMM PF01048. | NAD(+) synthase (glutamine-hydrolyzing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.440 |
| AEF84901.1 | AEF83635.1 | TREPR_3491 | TREPR_3297 | Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.424 |
page 1 of 4