STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtAmmonium transporter; Identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836. (453 aa)    
Predicted Functional Partners:
AEF85957.1
Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family.
 
 
 0.994
AEF86020.1
Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; overlaps another CDS with the same product name.
 
 
 0.970
AEF84636.1
Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; overlaps another CDS with the same product name.
 
 
 0.945
AEF86543.1
Conserved hypothetical protein.
  
 
 0.930
AEF83809.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.930
gltB
Glutamate synthase, large subunit; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
 
  
 0.854
AEF84719.1
Nitrogen fixation protein NifH/NifE; Identified by match to protein family HMM PF00142; match to protein family HMM PF00148; Belongs to the NifH/BchL/ChlL family.
  
  
 0.782
nifB
Nitrogenase cofactor biosynthesis protein NifB; Identified by match to protein family HMM PF02579; match to protein family HMM PF04055; match to protein family HMM TIGR01290.
  
  
 0.592
aspA
Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206.
   
  
 0.563
AEF87032.1
Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 0.538
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.