STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85520.1Conserved hypothetical protein; Identified by match to protein family HMM PF03683. (77 aa)    
Predicted Functional Partners:
AEF84121.1
Conserved hypothetical protein.
 
     0.951
AEF86737.1
Hypothetical protein; Identified by glimmer; putative.
       0.586
AEF84974.1
Conserved hypothetical protein.
  
     0.561
AEF84526.1
HicB; Identified by match to protein family HMM PF05534.
       0.556
AEF87014.1
Methyltransferase FkbM.
  
     0.414
AEF86597.1
Nucleotide-diphospho-sugar transferase domain protein.
  
     0.405
AEF84799.1
Conserved hypothetical protein.
  
     0.401
AEF85843.1
Conserved domain protein; Identified by match to protein family HMM PF07927.
 
     0.400
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.