STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84026.1Inner-membrane translocator; Identified by match to protein family HMM PF02653; overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family. (314 aa)    
Predicted Functional Partners:
AEF85490.1
Ribose import ATP-binding protein RbsA; Identified by match to protein family HMM PF00005.
 
 0.997
AEF85200.1
Inner-membrane translocator; Identified by match to protein family HMM PF02653; overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
AEF84782.1
Ribose import ATP-binding protein RbsA 1; Identified by match to protein family HMM PF00005.
 
 0.986
AEF86981.1
Basic membrane lipoprotein; Identified by match to protein family HMM PF02608.
 
 
 0.985
AEF84899.1
Membrane protein, Bmp family; Identified by match to protein family HMM PF02608.
 
 
 0.954
AEF84289.1
Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
 0.952
AEF84158.1
Membrane protein, Bmp family; Identified by match to protein family HMM PF02608.
 
 
 0.952
AEF86374.1
ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
AEF84639.1
MemBrane lipoprotein TpN38(b); Identified by match to protein family HMM PF02608.
 
  
 0.839
rbsA
ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein; Identified by match to protein family HMM PF00005.
     0.514
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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