STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85470.1Conserved hypothetical protein. (465 aa)    
Predicted Functional Partners:
nifH_1
Nitrogenase iron protein; Identified by match to protein family HMM PF00142; Belongs to the NifH/BchL/ChlL family.
 
 
 0.961
AEF86322.1
Conserved hypothetical protein.
     0.930
AEF84719.1
Nitrogen fixation protein NifH/NifE; Identified by match to protein family HMM PF00142; match to protein family HMM PF00148; Belongs to the NifH/BchL/ChlL family.
 
 
 0.783
AEF85643.1
Nitrogenase iron protein NifH; Identified by match to protein family HMM PF00142; Belongs to the NifH/BchL/ChlL family.
 
 
 0.744
nifH_2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.606
nifB
Nitrogenase cofactor biosynthesis protein NifB; Identified by match to protein family HMM PF02579; match to protein family HMM PF04055; match to protein family HMM TIGR01290.
  
  
 0.554
AEF85665.1
Glutathione import ATP-binding protein GsiA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528.
  
    0.507
AEF85194.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
       0.503
AEF85918.1
High-affinity nickel-transporter.
       0.503
AEF86973.1
Putative lipoprotein.
  
     0.502
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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