STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85665.1Glutathione import ATP-binding protein GsiA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528. (876 aa)    
Predicted Functional Partners:
AEF85194.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
 
  
 0.900
AEF84113.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.864
AEF85918.1
High-affinity nickel-transporter.
       0.773
AEF85654.1
Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656.
       0.737
AEF83974.1
Putative cobalt transport permease, CbiQ family; Identified by match to protein family HMM PF02361.
  
 
 0.644
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.
  
 
 0.644
AEF85780.1
Cobalt transport protein superfamily; Identified by match to protein family HMM PF02361.
  
 
 0.644
AEF86451.1
Putative extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
  
  
 0.634
AEF85934.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
 
  
 0.611
AEF83901.1
Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528.
 
  
 0.589
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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