Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF86451.1Putative extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. (548 aa)    
Predicted Functional Partners:
AEF85194.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
 
   0.853
AEF85859.1
Oligopeptide ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00496.
  
  
  0.842
AEF86352.1
Oligopeptide ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00496.
  
  
  0.841
AEF85665.1
Glutathione import ATP-binding protein GsiA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528.
  
 
 0.694
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
    0.690
AEF85260.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
   0.675
AEF83918.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
   0.670
AEF84113.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.648
AEF85654.1
Carbon monoxide dehydrogenase accessory protein CooC; Identified by match to protein family HMM PF01656.
       0.631
AEF86228.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
   0.622
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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