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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84987.1Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (288 aa)    
Predicted Functional Partners:
AEF84603.1
DbpA RNA binding domain protein; Identified by match to protein family HMM PF03880.
 
  
 0.797
AEF83746.1
Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639.
  
     0.773
pfkA-2
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
       0.773
AEF86028.1
Conserved hypothetical protein.
  
     0.772
AEF85696.1
Identified by match to protein family HMM PF02878.
 
   
 0.772
AEF85558.1
Putative recombination protein O.
 
     0.771
AEF84004.1
Identified by match to protein family HMM PF02325.
  
     0.771
AEF85246.1
Conserved hypothetical protein.
  
     0.769
raiA
Ribosomal subunit interface protein; Identified by match to protein family HMM TIGR00741.
 
    0.767
AEF85661.1
Phosphoribosyl transferase domain protein.
  
     0.766
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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