Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF85514.1ABC transporter integral membrane protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (360 aa)    
Predicted Functional Partners:
rbsA
ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.977
AEF84131.1
Conserved hypothetical protein.
 
  
 0.921
AEF85148.1
Conserved hypothetical protein.
 
  
 0.886
AEF84541.1
ABC transporter integral membrane protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.855
AEF86299.1
Hypothetical protein; Identified by glimmer; putative.
       0.814
AEF85784.1
Hypothetical protein; Identified by glimmer; putative.
 
 
 0.609
AEF84357.1
Branched-chain amino acid transport ATP-binding protein LivG; Identified by match to protein family HMM PF00005.
  
 
 0.579
AEF85116.1
Putative periplasmic binding proteins and sugar binding domain of the LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
  
 
 0.553
AEF85478.1
Periplasmic sugar-binding protein; Identified by match to protein family HMM PF00532.
  
 
 0.553
AEF85851.1
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
  
 
 0.553
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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