STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85005.1Hypothetical protein; Identified by glimmer; putative. (308 aa)    
Predicted Functional Partners:
AEF85018.1
NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
  
 
 0.813
hndB3
NAD-dependent formate dehydrogenase beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
  
 
 0.813
hndB1
NADH dehydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
   
 
 0.811
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
   0.803
AEF84133.1
Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257.
   
   0.800
hndC3
Fe-hydrogenase gamma subunit; Identified by match to protein family HMM PF01257.
   
   0.800
AEF85970.1
NADH dehydrogenase subunit E; Identified by match to protein family HMM PF01257.
   
   0.800
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.754
AEF84374.1
Membrane-associated phospholipid phosphatase; Identified by match to protein family HMM PF01569.
  
  
 0.433
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.