STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84221.1Conserved hypothetical protein. (85 aa)    
Predicted Functional Partners:
AEF86226.1
Rubredoxin/rubrerythrin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915.
  
     0.581
AEF84881.1
Radical SAM domain protein; Identified by match to protein family HMM PF00633; match to protein family HMM PF04055.
       0.546
AEF84721.1
Putative NADH dehydrogenase/nad(p)h nitroreductase; Identified by match to protein family HMM PF00881.
  
     0.476
AEF84712.1
Multimeric flavodoxin WrbA family protein; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358.
  
     0.444
AEF85802.1
Putative rubredoxin; Identified by match to protein family HMM PF00301.
  
     0.414
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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