STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84194.1Probable cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (625 aa)    
Predicted Functional Partners:
AEF84598.1
IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324.
  
 0.983
AEF86188.1
Srpi protein.
 
   
 0.937
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
   
 0.914
trxB
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
  
 
 0.909
AEF85447.1
Cystathionine gamma-lyase; Identified by match to protein family HMM PF01053.
     
 0.901
AEF86461.1
Methionine gamma-lyase (L-methioninase); Identified by match to protein family HMM PF01053.
     
 0.901
AEF86726.1
Serine acetyltransferase, plasmid; Identified by match to protein family HMM PF00132.
     
 0.777
AEF86955.1
Uba/ThiF-type NAD/FAD-binding protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
  
 
 0.755
AEF85428.1
Identified by match to protein family HMM PF03372.
    
   0.697
AEF86504.1
Identified by match to protein family HMM PF03372.
    
   0.697
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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