Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83667.1 | AEF85541.1 | TREPR_3735 | TREPR_3736 | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | Conserved hypothetical protein; Identified by match to protein family HMM PF03269. | 0.870 |
| AEF83667.1 | AEF85994.1 | TREPR_3735 | TREPR_3732 | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.529 |
| AEF83667.1 | AEF86032.1 | TREPR_3735 | TREPR_3731 | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706. | 0.455 |
| AEF83667.1 | AEF86597.1 | TREPR_3735 | TREPR_3734 | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | Nucleotide-diphospho-sugar transferase domain protein. | 0.823 |
| AEF83667.1 | AEF86982.1 | TREPR_3735 | TREPR_3733 | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | Galactoside O-acetyltransferase; Identified by match to protein family HMM PF00132. | 0.782 |
| AEF85541.1 | AEF83667.1 | TREPR_3736 | TREPR_3735 | Conserved hypothetical protein; Identified by match to protein family HMM PF03269. | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | 0.870 |
| AEF85541.1 | AEF85994.1 | TREPR_3736 | TREPR_3732 | Conserved hypothetical protein; Identified by match to protein family HMM PF03269. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.459 |
| AEF85541.1 | AEF86597.1 | TREPR_3736 | TREPR_3734 | Conserved hypothetical protein; Identified by match to protein family HMM PF03269. | Nucleotide-diphospho-sugar transferase domain protein. | 0.765 |
| AEF85541.1 | AEF86982.1 | TREPR_3736 | TREPR_3733 | Conserved hypothetical protein; Identified by match to protein family HMM PF03269. | Galactoside O-acetyltransferase; Identified by match to protein family HMM PF00132. | 0.661 |
| AEF85994.1 | AEF83667.1 | TREPR_3732 | TREPR_3735 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | 0.529 |
| AEF85994.1 | AEF85541.1 | TREPR_3732 | TREPR_3736 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Conserved hypothetical protein; Identified by match to protein family HMM PF03269. | 0.459 |
| AEF85994.1 | AEF86032.1 | TREPR_3732 | TREPR_3731 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706. | 0.663 |
| AEF85994.1 | AEF86428.1 | TREPR_3732 | TREPR_2408 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025. | 0.617 |
| AEF85994.1 | AEF86597.1 | TREPR_3732 | TREPR_3734 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Nucleotide-diphospho-sugar transferase domain protein. | 0.685 |
| AEF85994.1 | AEF86982.1 | TREPR_3732 | TREPR_3733 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Galactoside O-acetyltransferase; Identified by match to protein family HMM PF00132. | 0.542 |
| AEF86032.1 | AEF83667.1 | TREPR_3731 | TREPR_3735 | Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706. | Alpha-1,2-fucosyltransferase; Identified by match to protein family HMM PF01531. | 0.455 |
| AEF86032.1 | AEF85994.1 | TREPR_3731 | TREPR_3732 | Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.663 |
| AEF86032.1 | AEF86597.1 | TREPR_3731 | TREPR_3734 | Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706. | Nucleotide-diphospho-sugar transferase domain protein. | 0.463 |
| AEF86032.1 | AEF86982.1 | TREPR_3731 | TREPR_3733 | Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706. | Galactoside O-acetyltransferase; Identified by match to protein family HMM PF00132. | 0.459 |
| AEF86428.1 | AEF85994.1 | TREPR_2408 | TREPR_3732 | Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.617 |
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