STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85523.1LPS biosynthesis glycosyltransferase-like protein; Identified by match to protein family HMM PF00534. (347 aa)    
Predicted Functional Partners:
AEF85048.1
Putative membrane protein.
  
  
 0.768
AEF84577.1
Capsular polysaccharide biosynthesis protein; Identified by match to protein family HMM PF00534.
  
     0.700
AEF83950.1
Glycosyltransferase family 2; Identified by match to protein family HMM PF00535.
  
    0.655
AEF86511.1
Glycosyltransferase, family 2; Identified by match to protein family HMM PF00535.
  
    0.635
AEF86093.1
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993.
 
   
 0.547
AEF86387.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
 
 
 0.505
AEF86428.1
Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
  
  
 0.481
glf
UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031.
  
  
 0.472
AEF86750.1
Putative lipopolysaccharide biosynthesis; Identified by match to protein family HMM PF00534.
  
     0.461
AEF85994.1
Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534.
 
     0.441
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.