STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85132.1Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (566 aa)    
Predicted Functional Partners:
AEF85780.1
Cobalt transport protein superfamily; Identified by match to protein family HMM PF02361.
 
 0.991
AEF84324.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07155.
 
  
 0.910
AEF84113.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
  
  
0.836
AEF83974.1
Putative cobalt transport permease, CbiQ family; Identified by match to protein family HMM PF02361.
  
 
 0.644
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.
  
 
 0.644
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
  
   
 0.442
AEF83687.1
Kinase, PfkB family; Identified by match to protein family HMM PF00294.
       0.438
AEF84655.1
Radical SAM; Identified by match to protein family HMM PF00037; match to protein family HMM PF04055.
 
     0.430
AEF83874.1
Conserved hypothetical protein.
       0.420
AEF86642.1
Dipeptide transport ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
  
  
0.415
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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