STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85410.1Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (160 aa)    
Predicted Functional Partners:
AEF86201.1
Putative addiction module antidote protein, HigA family; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607.
       0.520
AEF86582.1
Peptidase, M22 family; Identified by match to protein family HMM PF00814.
  
 
 0.498
AEF84623.1
Conserved domain protein; Identified by match to protein family HMM PF00037.
   
   0.485
AEF85522.1
GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888.
     
 0.473
metG
methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.441
AEF84725.1
Conserved hypothetical protein.
 
     0.405
AEF84587.1
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
 
  
 0.404
AEF84094.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.401
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.