STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85616.1Conserved hypothetical protein. (1000 aa)    
Predicted Functional Partners:
AEF86571.1
ATP-dependent DNA helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.
  
 
 0.988
AEF83964.1
Putative UvrD/REP helicase; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.
  
 
 0.949
AEF86592.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.942
AEF83879.1
Tex protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371.
     
 0.775
AEF84199.1
Conserved hypothetical protein.
       0.773
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.571
AEF85458.1
Conserved hypothetical protein.
       0.550
AEF87030.1
Putative transporter, major facilitator family; Identified by match to protein family HMM PF07690.
       0.532
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.