STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84199.1Conserved hypothetical protein. (243 aa)    
Predicted Functional Partners:
AEF86571.1
ATP-dependent DNA helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.
       0.773
AEF85616.1
Conserved hypothetical protein.
       0.773
AEF83958.1
Putative methyltransferase CmuC; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.759
AEF85608.1
Putative methyltransferase CmuC; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.757
AEF83879.1
Tex protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371.
  
    0.751
AEF86807.1
Uroporphyrinogen decarboxylase (URO-D) superfamily; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.744
AEF86670.1
Veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.733
AEF86821.1
Putative veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.718
AEF84759.1
Putative veratrol:corrinoid protein metyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.712
AEF83883.1
Uroporphyrinogen decarboxylase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.664
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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