STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85168.1Putative membrane protein. (226 aa)    
Predicted Functional Partners:
AEF83985.1
Putative membrane protein.
 
     0.941
AEF85283.1
Amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891.
 
     0.810
AEF86246.1
Putative membrane protein.
 
     0.785
AEF86441.1
Lipoate-protein ligase A (Lipoate--protein ligase); Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545.
 
     0.602
gcvPA
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
 
     0.565
AEF85683.1
Glycine dehydrogenase (decarboxylating); Identified by match to protein family HMM PF01212; match to protein family HMM PF02347; overlaps another CDS with the same product name.
 
     0.561
AEF86761.1
Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
       0.558
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
     0.551
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
 
     0.540
AEF85704.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; Identified by match to protein family HMM PF00037.
       0.447
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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